Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth

Radoslaw Pajor, Ruth E. Falconer, Dmitri V. Grinev, Wilfred Otten

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Soil is very complex and diverse ecosystem providing services (including water supply and food production) valued over 33T$. Soil structure determines functionality of this ecosystem by regulating the distribution of water, oxygen and nutrients. The structure of soil is dynamic and subject to various physical and biological factors. Fungi are ubiquitous organisms in soil playing significant role in the stabilisation of soil aggregates, nutrients and carbon cycles. Fungal colonisation has been studied previously however only recent techniques allow 3-D analysis that is crucial to fully understand the impact of various physical properties of the pore space on fungal growth. This work combines X-ray microtomography with a modelling approach to develop a protocol allowing quantification and visualisation of the internal structure of soils, and its effect on fungal colonisation. We show an example of such analysis and indicate potential future development that will lead to better understanding of the dynamics of soil ecosystem.
Original languageEnglish
Title of host publication1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions "CESAR"
EditorsLis Wollesen de Jonge, Per Moldrup, Anders Lindblad Vendelboe
Place of PublicationDenmark
PublisherAarhus University
Pages283-287
Number of pages5
ISBN (Electronic)8791949599
StatePublished - Nov 2010
Event1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions - Tjele, Denmark

Conference

Conference1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions
Abbreviated titleCESAR
CountryDenmark
CityTjele
Period30/11/102/12/10
Internet address

Fingerprint

soil
colonization
nutrient
modeling
soil dynamics
soil ecosystem
soil aggregate
pore space
food production
soil structure
carbon cycle
ecosystem service
visualization
stabilization
physical property
water supply
fungus
oxygen
ecosystem
water

Cite this

Pajor, R., Falconer, R. E., Grinev, D. V., & Otten, W. (2010). Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth. In L. Wollesen de Jonge, P. Moldrup, & A. L. Vendelboe (Eds.), 1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions "CESAR" (pp. 283-287). Denmark: Aarhus University.

Pajor, Radoslaw; Falconer, Ruth E.; Grinev, Dmitri V.; Otten, Wilfred / Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth.

1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions "CESAR". ed. / Lis Wollesen de Jonge; Per Moldrup; Anders Lindblad Vendelboe. Denmark : Aarhus University, 2010. p. 283-287.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

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abstract = "Soil is very complex and diverse ecosystem providing services (including water supply and food production) valued over 33T$. Soil structure determines functionality of this ecosystem by regulating the distribution of water, oxygen and nutrients. The structure of soil is dynamic and subject to various physical and biological factors. Fungi are ubiquitous organisms in soil playing significant role in the stabilisation of soil aggregates, nutrients and carbon cycles. Fungal colonisation has been studied previously however only recent techniques allow 3-D analysis that is crucial to fully understand the impact of various physical properties of the pore space on fungal growth. This work combines X-ray microtomography with a modelling approach to develop a protocol allowing quantification and visualisation of the internal structure of soils, and its effect on fungal colonisation. We show an example of such analysis and indicate potential future development that will lead to better understanding of the dynamics of soil ecosystem.",
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Pajor, R, Falconer, RE, Grinev, DV & Otten, W 2010, Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth. in L Wollesen de Jonge, P Moldrup & AL Vendelboe (eds), 1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions "CESAR". Aarhus University, Denmark, pp. 283-287, 1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions, Tjele, Denmark, 30-2 December.

Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth. / Pajor, Radoslaw; Falconer, Ruth E.; Grinev, Dmitri V.; Otten, Wilfred.

1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions "CESAR". ed. / Lis Wollesen de Jonge; Per Moldrup; Anders Lindblad Vendelboe. Denmark : Aarhus University, 2010. p. 283-287.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

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T1 - Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth

AU - Pajor,Radoslaw

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AU - Grinev,Dmitri V.

AU - Otten,Wilfred

PY - 2010/11

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N2 - Soil is very complex and diverse ecosystem providing services (including water supply and food production) valued over 33T$. Soil structure determines functionality of this ecosystem by regulating the distribution of water, oxygen and nutrients. The structure of soil is dynamic and subject to various physical and biological factors. Fungi are ubiquitous organisms in soil playing significant role in the stabilisation of soil aggregates, nutrients and carbon cycles. Fungal colonisation has been studied previously however only recent techniques allow 3-D analysis that is crucial to fully understand the impact of various physical properties of the pore space on fungal growth. This work combines X-ray microtomography with a modelling approach to develop a protocol allowing quantification and visualisation of the internal structure of soils, and its effect on fungal colonisation. We show an example of such analysis and indicate potential future development that will lead to better understanding of the dynamics of soil ecosystem.

AB - Soil is very complex and diverse ecosystem providing services (including water supply and food production) valued over 33T$. Soil structure determines functionality of this ecosystem by regulating the distribution of water, oxygen and nutrients. The structure of soil is dynamic and subject to various physical and biological factors. Fungi are ubiquitous organisms in soil playing significant role in the stabilisation of soil aggregates, nutrients and carbon cycles. Fungal colonisation has been studied previously however only recent techniques allow 3-D analysis that is crucial to fully understand the impact of various physical properties of the pore space on fungal growth. This work combines X-ray microtomography with a modelling approach to develop a protocol allowing quantification and visualisation of the internal structure of soils, and its effect on fungal colonisation. We show an example of such analysis and indicate potential future development that will lead to better understanding of the dynamics of soil ecosystem.

M3 - Conference contribution

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BT - 1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions "CESAR"

PB - Aarhus University

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Pajor R, Falconer RE, Grinev DV, Otten W. Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth. In Wollesen de Jonge L, Moldrup P, Vendelboe AL, editors, 1st International Conference and Exploratory Workshop on Soil Architecture and Physico-Chemical Functions "CESAR". Denmark: Aarhus University. 2010. p. 283-287.